After completing his training Link begins his journey to find the remaining Sages. Meanwhile, Ganondorf continues looking for Princess Zelda and plotting to capture Link with the aid of the witches known as Twinrova.
Veran then possesses Nayru and travels back to the past in order to kill one of Link's ancestors so that Link will never be born! Link once again battles across time to save Hyrule - and himself!